Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm44503E9PYU5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Gm13385-201ENSMUST00000121089 220 ntBASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm44503E9PYU5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm8927-201ENSMUST00000181978 981 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm45784-201ENSMUST00000188360 142 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm7561-201ENSMUST00000211203 886 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm3222-201ENSMUST00000071282 990 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm44503E9PYU5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gm15376-201ENSMUST00000122258 783 ntBASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gm27847-201ENSMUST00000183711 107 ntBASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gm27375-201ENSMUST00000183799 107 ntBASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm44503E9PYU5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm44503E9PYU5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms