Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BC035044E0CXF8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Gm9727-201ENSMUST00000161387 555 ntBASIC11.96□□□□□ -0.49
BC035044E0CXF8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.96□□□□□ -0.49
BC035044E0CXF8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.96□□□□□ -0.49
BC035044E0CXF8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BC035044E0CXF8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.96□□□□□ -0.5
BC035044E0CXF8 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.96□□□□□ -0.5
BC035044E0CXF8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BC035044E0CXF8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.95□□□□□ -0.5
BC035044E0CXF8 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.95□□□□□ -0.5
BC035044E0CXF8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.95□□□□□ -0.5
BC035044E0CXF8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BC035044E0CXF8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms