Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav12d-1A0N8R0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav12d-1A0N8R0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Gm27920-201ENSMUST00000183953 96 ntBASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Gm21362-201ENSMUST00000194272 928 ntBASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Gm44608-201ENSMUST00000206827 855 ntBASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav12d-1A0N8R0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Trav12d-1A0N8R0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav12d-1A0N8R0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms