Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm44608-201ENSMUST00000206827 855 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Gm18057-201ENSMUST00000208220 503 ntBASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Gm45612-201ENSMUST00000211320 160 ntBASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc112A0AUP1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Acot6-202ENSMUST00000222921 3622 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm27741-201ENSMUST00000185060 237 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm29310-201ENSMUST00000185468 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21825-201ENSMUST00000185728 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm29109-201ENSMUST00000185895 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21896-201ENSMUST00000186520 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21873-201ENSMUST00000186728 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21794-201ENSMUST00000187056 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21880-201ENSMUST00000187275 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21826-201ENSMUST00000187451 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21198-201ENSMUST00000188393 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21749-201ENSMUST00000189343 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21901-201ENSMUST00000189568 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm29424-201ENSMUST00000189716 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm28599-201ENSMUST00000189838 694 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21867-201ENSMUST00000189917 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm29269-201ENSMUST00000190087 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21722-201ENSMUST00000190153 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm28423-201ENSMUST00000190701 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21899-201ENSMUST00000190745 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21910-201ENSMUST00000191163 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm21849-201ENSMUST00000191571 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm28678-201ENSMUST00000191593 696 ntBASIC16.09■□□□□ 0.17
Ccdc112A0AUP1 Gm20910-201ENSMUST00000193268 696 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms