Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc194A0A140LIT1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Gm12882-201ENSMUST00000121696 517 ntBASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc194A0A140LIT1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc194A0A140LIT1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Gm15467-201ENSMUST00000120582 445 ntBASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Gm20553-201ENSMUST00000204205 844 ntBASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Gm18057-201ENSMUST00000208220 503 ntBASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms