Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Pck2-205ENSMUST00000226352 2784 ntBASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Rprl3-201ENSMUST00000157400 290 ntBASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav8-1A0A075B641 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav8-1A0A075B641 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms