Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.01□□□□□ -0.65
CcsQ9WU84 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CcsQ9WU84 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CcsQ9WU84 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.01□□□□□ -0.65
CcsQ9WU84 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CcsQ9WU84 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CcsQ9WU84 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Mmp14-206ENSMUST00000225641 3238 ntBASIC11□□□□□ -0.65
CcsQ9WU84 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11□□□□□ -0.65
CcsQ9WU84 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
CcsQ9WU84 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Gm1401-201ENSMUST00000122048 772 ntBASIC11□□□□□ -0.65
CcsQ9WU84 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Gm18206-201ENSMUST00000207027 926 ntBASIC11□□□□□ -0.65
CcsQ9WU84 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 AW822252-206ENSMUST00000208904 237 ntBASIC11□□□□□ -0.65
CcsQ9WU84 Gm44241-201ENSMUST00000203230 1662 ntBASIC11□□□□□ -0.65
CcsQ9WU84 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
CcsQ9WU84 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CcsQ9WU84 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11□□□□□ -0.65
CcsQ9WU84 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.99□□□□□ -0.65
CcsQ9WU84 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Gm11764-201ENSMUST00000120221 623 ntBASIC10.99□□□□□ -0.65
CcsQ9WU84 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.99□□□□□ -0.65
CcsQ9WU84 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CcsQ9WU84 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CcsQ9WU84 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms