Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Gm38225-201ENSMUST00000194001 393 ntBASIC13.77□□□□□ -0.21
Cdh17Q9R100 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.77□□□□□ -0.21
Cdh17Q9R100 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh17Q9R100 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.76□□□□□ -0.21
Cdh17Q9R100 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.76□□□□□ -0.21
Cdh17Q9R100 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.76□□□□□ -0.21
Cdh17Q9R100 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.76□□□□□ -0.21
Cdh17Q9R100 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh17Q9R100 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 BC001981-202ENSMUST00000191393 1545 ntBASIC13.75□□□□□ -0.21
Cdh17Q9R100 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.75□□□□□ -0.21
Cdh17Q9R100 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.75□□□□□ -0.21
Cdh17Q9R100 Gm6222-201ENSMUST00000120787 396 ntBASIC13.75□□□□□ -0.21
Cdh17Q9R100 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Rprl2-201ENSMUST00000157150 290 ntBASIC13.75□□□□□ -0.21
Cdh17Q9R100 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.75□□□□□ -0.21
Cdh17Q9R100 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh17Q9R100 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms