Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gm14722-201ENSMUST00000118943 689 ntBASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trem1Q9JKE2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Gm10013-201ENSMUST00000106074 672 ntBASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trem1Q9JKE2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm6433-201ENSMUST00000118634 875 ntBASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm9013-201ENSMUST00000132939 882 ntBASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trem1Q9JKE2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms