Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdc40Q9DC48 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Gm37230-201ENSMUST00000194491 818 ntBASIC13.15□□□□□ -0.3
Cdc40Q9DC48 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdc40Q9DC48 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdc40Q9DC48 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm5866-201ENSMUST00000177881 973 ntBASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm18766-201ENSMUST00000189811 808 ntBASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm29541-201ENSMUST00000191351 678 ntBASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdc40Q9DC48 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdc40Q9DC48 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms