Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps28Q9D1C8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gm12882-201ENSMUST00000121696 517 ntBASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gm27321-201ENSMUST00000185021 205 ntBASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps28Q9D1C8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps28Q9D1C8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps28Q9D1C8 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms