Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.51■□□□□ 0.39
Nip7Q9CXK8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Gm6983-201ENSMUST00000214912 628 ntBASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nip7Q9CXK8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Snora78-201ENSMUST00000158630 128 ntBASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Gm27731-201ENSMUST00000185192 107 ntBASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Gm45331-201ENSMUST00000209868 554 ntBASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nip7Q9CXK8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Gm37424-201ENSMUST00000191727 561 ntBASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms