Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm24694-201ENSMUST00000180054 110 ntBASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm27663-201ENSMUST00000184839 110 ntBASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC13.38□□□□□ -0.27
Otud1Q9CUB6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otud1Q9CUB6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Gm20445-201ENSMUST00000061905 565 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otud1Q9CUB6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otud1Q9CUB6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.35□□□□□ -0.27
Otud1Q9CUB6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms