Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Gm20949-201ENSMUST00000206478 952 ntBASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sft2d3Q9CSV6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm15693-201ENSMUST00000120470 637 ntBASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm27622-201ENSMUST00000183779 60 ntBASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sft2d3Q9CSV6 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gm7063-201ENSMUST00000186840 981 ntBASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sft2d3Q9CSV6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms