Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Acot6-202ENSMUST00000222921 3622 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Gm15678-201ENSMUST00000117573 960 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Gm10766-202ENSMUST00000194123 606 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Gm5425-201ENSMUST00000214125 459 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Gm5356-201ENSMUST00000093326 615 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Prpf8Q99PV0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Prpf8Q99PV0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Prpf8Q99PV0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Prpf8Q99PV0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm9002-201ENSMUST00000178437 499 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm2495-201ENSMUST00000191160 466 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm19220-201ENSMUST00000222682 803 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm12341-201ENSMUST00000119724 503 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm37917-201ENSMUST00000194711 392 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Prpf8Q99PV0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prpf8Q99PV0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prpf8Q99PV0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prpf8Q99PV0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prpf8Q99PV0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prpf8Q99PV0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms