Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.06□□□□□ -0.16
Trim33Q99PP7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Mir449b-201ENSMUST00000104833 80 ntBASIC14.06□□□□□ -0.16
Trim33Q99PP7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Gm36991-201ENSMUST00000191800 648 ntBASIC14.06□□□□□ -0.16
Trim33Q99PP7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim33Q99PP7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.05□□□□□ -0.16
Trim33Q99PP7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim33Q99PP7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm29310-201ENSMUST00000185468 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21825-201ENSMUST00000185728 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm29109-201ENSMUST00000185895 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21896-201ENSMUST00000186520 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21873-201ENSMUST00000186728 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21794-201ENSMUST00000187056 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21880-201ENSMUST00000187275 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21826-201ENSMUST00000187451 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21198-201ENSMUST00000188393 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21749-201ENSMUST00000189343 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21901-201ENSMUST00000189568 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm29424-201ENSMUST00000189716 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm28599-201ENSMUST00000189838 694 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21867-201ENSMUST00000189917 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm29269-201ENSMUST00000190087 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21722-201ENSMUST00000190153 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm28423-201ENSMUST00000190701 696 ntBASIC14.04□□□□□ -0.16
Trim33Q99PP7 Gm21899-201ENSMUST00000190745 696 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms