Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Gm14719-201ENSMUST00000121891 340 ntBASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Gtf2ird2Q99NI3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Gm33320-201ENSMUST00000192232 530 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gtf2ird2Q99NI3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gtf2ird2Q99NI3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Gm4875-201ENSMUST00000118257 786 ntBASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Gtf2ird2Q99NI3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gtf2ird2Q99NI3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms