Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 AY702102-202ENSMUST00000194651 1173 ntBASIC12.4□□□□□ -0.42
Scrt1Q99M85 Gm5035-201ENSMUST00000215581 927 ntBASIC12.4□□□□□ -0.42
Scrt1Q99M85 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scrt1Q99M85 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scrt1Q99M85 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Scrt1Q99M85 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Scrt1Q99M85 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Scrt1Q99M85 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scrt1Q99M85 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gm15806-201ENSMUST00000120696 955 ntBASIC12.39□□□□□ -0.43
Scrt1Q99M85 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.39□□□□□ -0.43
Scrt1Q99M85 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.39□□□□□ -0.43
Scrt1Q99M85 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.39□□□□□ -0.43
Scrt1Q99M85 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.39□□□□□ -0.43
Scrt1Q99M85 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.39□□□□□ -0.43
Scrt1Q99M85 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scrt1Q99M85 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scrt1Q99M85 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms