Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cstf3Q99LI7 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm12882-201ENSMUST00000121696 517 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Rprl2-201ENSMUST00000157150 290 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm8000-201ENSMUST00000188378 592 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm38225-201ENSMUST00000194001 393 ntBASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf3Q99LI7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.66□□□□□ -0.22
Cstf3Q99LI7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf3Q99LI7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf3Q99LI7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms