Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Gm37714-201ENSMUST00000194742 342 ntBASIC15.03■□□□□ -0
Pcdha9Q91Y11 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.03■□□□□ -0
Pcdha9Q91Y11 Gm43703-201ENSMUST00000200523 763 ntBASIC15.03■□□□□ -0
Pcdha9Q91Y11 Gm7775-201ENSMUST00000218871 853 ntBASIC15.03■□□□□ -0
Pcdha9Q91Y11 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdha9Q91Y11 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdha9Q91Y11 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdha9Q91Y11 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdha9Q91Y11 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm12585-201ENSMUST00000117307 290 ntBASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm15393-201ENSMUST00000120499 219 ntBASIC15□□□□□ -0.01
Pcdha9Q91Y11 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15□□□□□ -0.01
Pcdha9Q91Y11 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms