Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ddx41Q91VN6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Mir1897-201ENSMUST00000122581 272 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Gm9726-201ENSMUST00000180321 678 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Gm27631-201ENSMUST00000184163 466 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Gm37230-201ENSMUST00000194491 818 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Gm7730-201ENSMUST00000212486 454 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Ddx41Q91VN6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Gm27838-201ENSMUST00000184829 128 ntBASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Gm16476-201ENSMUST00000221544 139 ntBASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx41Q91VN6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Syt7-204ENSMUST00000223586 1344 ntBASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms