Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.96□□□□□ -0.17
Vsx1Q91V10 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Mir3102-201ENSMUST00000175555 104 ntBASIC13.96□□□□□ -0.17
Vsx1Q91V10 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx1Q91V10 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Vsx1Q91V10 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Vsx1Q91V10 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx1Q91V10 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.95□□□□□ -0.18
Vsx1Q91V10 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.95□□□□□ -0.18
Vsx1Q91V10 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx1Q91V10 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Gm27731-201ENSMUST00000185192 107 ntBASIC13.94□□□□□ -0.18
Vsx1Q91V10 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.94□□□□□ -0.18
Vsx1Q91V10 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vsx1Q91V10 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Gm8749-201ENSMUST00000117737 331 ntBASIC13.93□□□□□ -0.18
Vsx1Q91V10 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Gm27486-201ENSMUST00000184923 80 ntBASIC13.93□□□□□ -0.18
Vsx1Q91V10 Gm2495-201ENSMUST00000191160 466 ntBASIC13.93□□□□□ -0.18
Vsx1Q91V10 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vsx1Q91V10 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms