Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tram1Q91V04 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.16□□□□□ -0.46
Tram1Q91V04 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.16□□□□□ -0.46
Tram1Q91V04 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tram1Q91V04 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.15□□□□□ -0.46
Tram1Q91V04 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Gm27357-201ENSMUST00000183754 135 ntBASIC12.15□□□□□ -0.46
Tram1Q91V04 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.15□□□□□ -0.46
Tram1Q91V04 Gm45747-201ENSMUST00000212203 999 ntBASIC12.15□□□□□ -0.46
Tram1Q91V04 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tram1Q91V04 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tram1Q91V04 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tram1Q91V04 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tram1Q91V04 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tram1Q91V04 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tram1Q91V04 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.14□□□□□ -0.47
Tram1Q91V04 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.14□□□□□ -0.47
Tram1Q91V04 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm7222-201ENSMUST00000117512 906 ntBASIC12.14□□□□□ -0.47
Tram1Q91V04 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.14□□□□□ -0.47
Tram1Q91V04 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.14□□□□□ -0.47
Tram1Q91V04 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.14□□□□□ -0.47
Tram1Q91V04 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tram1Q91V04 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tram1Q91V04 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.13□□□□□ -0.47
Tram1Q91V04 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms