Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
StrcQ8VIM6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.44■□□□□ 0.22
StrcQ8VIM6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
StrcQ8VIM6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
StrcQ8VIM6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Gm6447-201ENSMUST00000118905 835 ntBASIC16.43■□□□□ 0.22
StrcQ8VIM6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Gm38317-201ENSMUST00000195564 343 ntBASIC16.43■□□□□ 0.22
StrcQ8VIM6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.43■□□□□ 0.22
StrcQ8VIM6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
StrcQ8VIM6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm15782-201ENSMUST00000121073 445 ntBASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm13316-201ENSMUST00000140537 691 ntBASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm37042-201ENSMUST00000193816 581 ntBASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Gm32025-201ENSMUST00000217960 307 ntBASIC16.42■□□□□ 0.22
StrcQ8VIM6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
StrcQ8VIM6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Gm22902-201ENSMUST00000158488 302 ntBASIC16.41■□□□□ 0.22
StrcQ8VIM6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
StrcQ8VIM6 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.41■□□□□ 0.22
StrcQ8VIM6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
StrcQ8VIM6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.41■□□□□ 0.22
StrcQ8VIM6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
StrcQ8VIM6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms