Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim60Q8VI40 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gm44608-201ENSMUST00000206827 855 ntBASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim60Q8VI40 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.6□□□□□ -0.07
Trim60Q8VI40 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.6□□□□□ -0.07
Trim60Q8VI40 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim60Q8VI40 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.6□□□□□ -0.07
Trim60Q8VI40 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim60Q8VI40 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.59□□□□□ -0.07
Trim60Q8VI40 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.59□□□□□ -0.07
Trim60Q8VI40 Gm17271-201ENSMUST00000165535 355 ntBASIC14.59□□□□□ -0.07
Trim60Q8VI40 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim60Q8VI40 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms