Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Gm8515-201ENSMUST00000194852 576 ntBASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Gm6180-201ENSMUST00000065243 498 ntBASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdhr1Q8VHP6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cdhr1Q8VHP6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.83□□□□□ -0.19
Cdhr1Q8VHP6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdhr1Q8VHP6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdhr1Q8VHP6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdhr1Q8VHP6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm15957-201ENSMUST00000118893 974 ntBASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm28631-201ENSMUST00000190740 334 ntBASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm37917-201ENSMUST00000194711 392 ntBASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdhr1Q8VHP6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdhr1Q8VHP6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms