Protein–RNA interactions for Protein: Q8VE99

Ccdc115, Coiled-coil domain-containing protein 115, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc115Q8VE99 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ccdc115Q8VE99 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc115Q8VE99 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc115Q8VE99 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc115Q8VE99 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Ccdc115Q8VE99 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Rubie-203ENSMUST00000227803 2430 ntBASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc115Q8VE99 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Gm12350-201ENSMUST00000121208 462 ntBASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Gm2272-201ENSMUST00000194903 582 ntBASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Gm2651-201ENSMUST00000203560 838 ntBASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc115Q8VE99 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc115Q8VE99 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc115Q8VE99 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc115Q8VE99 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc115Q8VE99 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc115Q8VE99 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc115Q8VE99 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms