Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.36□□□□□ -0.27
Ndc1Q8VCB1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Gm3436-201ENSMUST00000179930 840 ntBASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ndc1Q8VCB1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Gm7488-201ENSMUST00000117148 684 ntBASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Gm15321-201ENSMUST00000121290 288 ntBASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Gm29667-201ENSMUST00000190817 490 ntBASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ndc1Q8VCB1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ndc1Q8VCB1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ndc1Q8VCB1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ndc1Q8VCB1 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.33□□□□□ -0.27
Ndc1Q8VCB1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ndc1Q8VCB1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ndc1Q8VCB1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Gm24694-201ENSMUST00000180054 110 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms