Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 AC125350.1-201ENSMUST00000225115 903 ntBASIC17■□□□□ 0.31
Ccdc9Q8VC31 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc9Q8VC31 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ccdc9Q8VC31 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Mir6404-201ENSMUST00000183699 94 ntBASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Gm29518-201ENSMUST00000190858 372 ntBASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc9Q8VC31 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Gm6345-202ENSMUST00000180900 204 ntBASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Gm17808-201ENSMUST00000200859 894 ntBASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc9Q8VC31 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc9Q8VC31 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms