Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup35Q8R4R6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup35Q8R4R6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup35Q8R4R6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup35Q8R4R6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Mir7071-201ENSMUST00000184847 69 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Rps4l-201ENSMUST00000071745 943 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm10154-201ENSMUST00000084445 354 ntBASIC11.54□□□□□ -0.56
Nup35Q8R4R6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup35Q8R4R6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Gm5479-201ENSMUST00000160578 435 ntBASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 AV026068-213ENSMUST00000223675 1171 ntBASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup35Q8R4R6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nup35Q8R4R6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nup35Q8R4R6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nup35Q8R4R6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms