Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gm27306-201ENSMUST00000183970 107 ntBASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gm6916-202ENSMUST00000205523 195 ntBASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gm46209-201ENSMUST00000217912 553 ntBASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3a1Q8K4Z5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Gm27321-201ENSMUST00000185021 205 ntBASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.29■□□□□ 0.36
Sf3a1Q8K4Z5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Gm9063-201ENSMUST00000223299 582 ntBASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3a1Q8K4Z5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sf3a1Q8K4Z5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms