Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf4Q8K4J2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 AA414768-201ENSMUST00000121924 1257 ntBASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ebf4Q8K4J2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Ebf4Q8K4J2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms