Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm11745-201ENSMUST00000121669 448 ntBASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm5264-201ENSMUST00000190584 848 ntBASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cchcr1Q8K2I2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Mir1895-201ENSMUST00000122615 79 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gm27494-201ENSMUST00000184735 189 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 AA619741-201ENSMUST00000195095 646 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gm44771-201ENSMUST00000206975 626 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cchcr1Q8K2I2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Gm8000-201ENSMUST00000188378 592 ntBASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms