Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim5Q8CI51 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim5Q8CI51 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13□□□□□ -0.33
Pdlim5Q8CI51 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Gm8000-201ENSMUST00000188378 592 ntBASIC13□□□□□ -0.33
Pdlim5Q8CI51 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13□□□□□ -0.33
Pdlim5Q8CI51 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Grk6-205ENSMUST00000224653 2976 ntBASIC13□□□□□ -0.33
Pdlim5Q8CI51 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim5Q8CI51 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim5Q8CI51 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim5Q8CI51 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms