Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip3Q8CHD8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip3Q8CHD8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip3Q8CHD8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab11fip3Q8CHD8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Gm18307-201ENSMUST00000206864 949 ntBASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab11fip3Q8CHD8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rab11fip3Q8CHD8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Gm9002-201ENSMUST00000178437 499 ntBASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Gm29741-201ENSMUST00000192667 421 ntBASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab11fip3Q8CHD8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Mir698-201ENSMUST00000102164 109 ntBASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gm15806-201ENSMUST00000120696 955 ntBASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gm12138-201ENSMUST00000122180 951 ntBASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.2■□□□□ 0.5
Rab11fip3Q8CHD8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms