Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ccdc87Q8CDL9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc87Q8CDL9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc87Q8CDL9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Gm37230-201ENSMUST00000194491 818 ntBASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Acot6-202ENSMUST00000222921 3622 ntBASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Gm15889-202ENSMUST00000212669 2443 ntBASIC15□□□□□ -0.01
Ccdc87Q8CDL9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm16026-204ENSMUST00000162652 683 ntBASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc87Q8CDL9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc87Q8CDL9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms