Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Uba3Q8C878 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Uba3Q8C878 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Uba3Q8C878 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Uba3Q8C878 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.9□□□□□ -0.02
Uba3Q8C878 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Uba3Q8C878 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Uba3Q8C878 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Uba3Q8C878 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.89□□□□□ -0.03
Uba3Q8C878 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.89□□□□□ -0.03
Uba3Q8C878 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.89□□□□□ -0.03
Uba3Q8C878 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Uba3Q8C878 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.89□□□□□ -0.03
Uba3Q8C878 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Uba3Q8C878 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Uba3Q8C878 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.88□□□□□ -0.03
Uba3Q8C878 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.88□□□□□ -0.03
Uba3Q8C878 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Gm14767-201ENSMUST00000121559 586 ntBASIC14.88□□□□□ -0.03
Uba3Q8C878 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.88□□□□□ -0.03
Uba3Q8C878 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.88□□□□□ -0.03
Uba3Q8C878 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.88□□□□□ -0.03
Uba3Q8C878 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Uba3Q8C878 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Uba3Q8C878 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm15653-201ENSMUST00000119247 907 ntBASIC14.87□□□□□ -0.03
Uba3Q8C878 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.87□□□□□ -0.03
Uba3Q8C878 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm9063-201ENSMUST00000223299 582 ntBASIC14.87□□□□□ -0.03
Uba3Q8C878 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Uba3Q8C878 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Uba3Q8C878 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Uba3Q8C878 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms