Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Gm25948-201ENSMUST00000175334 112 ntBASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim9Q8C7M3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Gm27622-201ENSMUST00000183779 60 ntBASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Gm27533-201ENSMUST00000183800 152 ntBASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim9Q8C7M3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.59■□□□□ 0.09
Trim9Q8C7M3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trim9Q8C7M3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trim9Q8C7M3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim9Q8C7M3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim9Q8C7M3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim9Q8C7M3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim9Q8C7M3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Shd-206ENSMUST00000225145 998 ntBASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim9Q8C7M3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Mir1897-201ENSMUST00000122581 272 ntBASIC15.57■□□□□ 0.08
Trim9Q8C7M3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim9Q8C7M3 Gm6916-202ENSMUST00000205523 195 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms