Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Gm27306-201ENSMUST00000183970 107 ntBASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc60Q8C4J0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Gm9229-201ENSMUST00000222777 126 ntBASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc60Q8C4J0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Gm12151-201ENSMUST00000121374 290 ntBASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Gm33320-201ENSMUST00000192232 530 ntBASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc60Q8C4J0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.02■□□□□ 0.47
Ccdc60Q8C4J0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Ccdc60Q8C4J0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.02■□□□□ 0.47
Ccdc60Q8C4J0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc60Q8C4J0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc60Q8C4J0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc60Q8C4J0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Gm27989-201ENSMUST00000184721 107 ntBASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc60Q8C4J0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms