Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm28760-201ENSMUST00000185995 736 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm42612-201ENSMUST00000197986 623 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm43170-201ENSMUST00000199827 612 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.42□□□□□ -0.26
Cdk5rap1Q8BTW8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm10766-202ENSMUST00000194123 606 ntBASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk5rap1Q8BTW8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm28631-201ENSMUST00000190740 334 ntBASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm37714-201ENSMUST00000194742 342 ntBASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk5rap1Q8BTW8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms