Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Gm29741-201ENSMUST00000192667 421 ntBASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scfd1Q8BRF7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Scfd1Q8BRF7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm11524-201ENSMUST00000119349 807 ntBASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm9002-201ENSMUST00000178437 499 ntBASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm27772-201ENSMUST00000184900 187 ntBASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Scfd1Q8BRF7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm43433-201ENSMUST00000196573 481 ntBASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms