Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm11628-201ENSMUST00000117568 171 ntBASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm27320-201ENSMUST00000184892 109 ntBASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smg1Q8BKX6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Gm6152-201ENSMUST00000151704 340 ntBASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smg1Q8BKX6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm12208-201ENSMUST00000122004 163 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm14130-201ENSMUST00000118417 987 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm2991-201ENSMUST00000173338 480 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Mir6927-201ENSMUST00000184494 71 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm18584-201ENSMUST00000203098 964 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Mir686-201ENSMUST00000102174 109 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm23200-201ENSMUST00000104379 132 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm13369-201ENSMUST00000119442 987 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smg1Q8BKX6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Gm44545-201ENSMUST00000208262 746 ntBASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Gm18212-201ENSMUST00000211678 889 ntBASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smg1Q8BKX6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms