Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rnf38Q8BI21 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Gm8000-201ENSMUST00000188378 592 ntBASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf38Q8BI21 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Mir3113-201ENSMUST00000175478 76 ntBASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm5264-201ENSMUST00000190584 848 ntBASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.64□□□□□ -0.23
Rnf38Q8BI21 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf38Q8BI21 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms