Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.17□□□□□ -0.3
Atg4dQ8BGV9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Gm10576-201ENSMUST00000191927 825 ntBASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atg4dQ8BGV9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Atg4dQ8BGV9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atg4dQ8BGV9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atg4dQ8BGV9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atg4dQ8BGV9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atg4dQ8BGV9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atg4dQ8BGV9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.14□□□□□ -0.31
Atg4dQ8BGV9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms