Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Gm11524-201ENSMUST00000119349 807 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Usp6nlQ80XC3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Gm12742-201ENSMUST00000117326 410 ntBASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Gm15429-201ENSMUST00000151268 798 ntBASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Mir6420-201ENSMUST00000185032 102 ntBASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Gm7287-201ENSMUST00000205267 602 ntBASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Usp6nlQ80XC3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gm12957-201ENSMUST00000117835 377 ntBASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gm13226-201ENSMUST00000117838 404 ntBASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gm13385-201ENSMUST00000121089 220 ntBASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gm15376-201ENSMUST00000122258 783 ntBASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Gm27486-201ENSMUST00000184923 80 ntBASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms