Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Usp8Q80U87 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.2□□□□□ -0.14
Usp8Q80U87 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp8Q80U87 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Gm15427-201ENSMUST00000117288 531 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Gm12260-201ENSMUST00000122447 411 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Rpph1-201ENSMUST00000175096 319 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Gm37230-201ENSMUST00000194491 818 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Gm44492-201ENSMUST00000197012 141 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.19□□□□□ -0.14
Usp8Q80U87 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp8Q80U87 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp8Q80U87 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Mir3113-201ENSMUST00000175478 76 ntBASIC14.18□□□□□ -0.14
Usp8Q80U87 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Gm18206-201ENSMUST00000207027 926 ntBASIC14.18□□□□□ -0.14
Usp8Q80U87 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp8Q80U87 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp8Q80U87 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms