Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Gm27920-201ENSMUST00000183953 96 ntBASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Matn2-206ENSMUST00000228570 2798 ntBASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Prpf38bQ80SY5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Shd-206ENSMUST00000225145 998 ntBASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf38bQ80SY5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm19220-201ENSMUST00000222682 803 ntBASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf38bQ80SY5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf38bQ80SY5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms