Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Gm27618-201ENSMUST00000183671 60 ntBASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smarcc2Q6PDG5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 BC001981-202ENSMUST00000191393 1545 ntBASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc2Q6PDG5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Gm27622-201ENSMUST00000183779 60 ntBASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc2Q6PDG5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gm15957-201ENSMUST00000118893 974 ntBASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gm17837-201ENSMUST00000186435 985 ntBASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gm28630-201ENSMUST00000187806 498 ntBASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Gm38294-201ENSMUST00000192831 381 ntBASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms