Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm10275-202ENSMUST00000168697 495 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Mir6956-201ENSMUST00000183598 62 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm10275-201ENSMUST00000092620 635 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Casc4Q6P2L7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Gm38294-201ENSMUST00000192831 381 ntBASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Casc4Q6P2L7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Casc4Q6P2L7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.33□□□□□ -0.11
Casc4Q6P2L7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Casc4Q6P2L7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Casc4Q6P2L7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Gm25144-201ENSMUST00000179561 110 ntBASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Gm25352-201ENSMUST00000179815 110 ntBASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Casc4Q6P2L7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Gm5566-201ENSMUST00000116118 459 ntBASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms