Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sp140Q6NSQ5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gm6222-201ENSMUST00000120787 396 ntBASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gm29541-201ENSMUST00000191351 678 ntBASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gm43474-201ENSMUST00000196415 774 ntBASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.35□□□□□ -0.11
Sp140Q6NSQ5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm24513-201ENSMUST00000174964 138 ntBASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm27397-201ENSMUST00000184997 107 ntBASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm18049-201ENSMUST00000208909 581 ntBASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sp140Q6NSQ5 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.33□□□□□ -0.11
Sp140Q6NSQ5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sp140Q6NSQ5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Sp140Q6NSQ5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 BC001981-202ENSMUST00000191393 1545 ntBASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm25287-201ENSMUST00000103846 110 ntBASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm22918-201ENSMUST00000103855 110 ntBASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm15957-201ENSMUST00000118893 974 ntBASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Gm18766-201ENSMUST00000189811 808 ntBASIC14.33□□□□□ -0.12
Sp140Q6NSQ5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms